CDS

Accession Number TCMCG023C08488
gbkey CDS
Protein Id PIN18731.1
Location complement(join(28460..28552,28636..28712,28827..28930,29023..29132,29234..29553,29620..29914,29996..30217,30692..30931,31022..31111,31194..31744,34008..34251))
Organism Handroanthus impetiginosus
locus_tag CDL12_08582

Protein

Length 781aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA324125, BioSample:SAMN05195323
db_source NKXS01001408.1
Definition Heterogeneous nuclear ribonucleoprotein R (RRM superfamily) [Handroanthus impetiginosus]
Locus_tag CDL12_08582

EGGNOG-MAPPER Annotation

COG_category A
Description RNA recognition motif
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K12885        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03040        [VIEW IN KEGG]
map03040        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003730        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0007623        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0030425        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032270        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034250        [VIEW IN EMBL-EBI]
GO:0036477        [VIEW IN EMBL-EBI]
GO:0042995        [VIEW IN EMBL-EBI]
GO:0043005        [VIEW IN EMBL-EBI]
GO:0043025        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044297        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044463        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045727        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0048027        [VIEW IN EMBL-EBI]
GO:0048511        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051247        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070937        [VIEW IN EMBL-EBI]
GO:0071204        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090365        [VIEW IN EMBL-EBI]
GO:0090367        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097447        [VIEW IN EMBL-EBI]
GO:0097458        [VIEW IN EMBL-EBI]
GO:0120025        [VIEW IN EMBL-EBI]
GO:0120038        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903311        [VIEW IN EMBL-EBI]
GO:1903312        [VIEW IN EMBL-EBI]
GO:1990635        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGCCACCCAGAGTGACGAAGAGAACTCCGGCGGGGCCGGGTAGCAAGAGAGCTGGGCGTGGAAGGGGGGCGGCGAAGGTGCAGCCTGAATTCCACCCTGAGGAATCAAACGTGCGATCGGAGGAGGAGGAGGTTGAGGAAGAAAAGCGGCCGATAGCTGTGGAGGAGAAGGAGATTGAGCCTGAGGAAAAGGTGAAGACGGGGAACAAACAGGCGGAGGAGAATGAAGATGCTTCTGGGAGGAAAAGCGACTATGCAAAAGAATCCGTTGATGAGTATGAAAAAGATGAACGGTTGGACTTGGAGGATAATGACCCTGAATTTGAGCCTGAAGAATATGGTGGTGTAGACTATGATGAGAAGGAAACTGAGCAAGATCCTCGAGAAGAGGGAGGTGAAGTAGAAGAAGATCCTGAAGAAGTGGATGTTGGTGAAGAAGAAGAGGGTGATGTGGTTGAGGAGGAAATGGAAGGTGTGCCTGAAGAGCTTGAACCTGAGGAAGATTATGAGCGTGTAGAAGAGCACACTGAGATGGGTGATGCTGCCGAGGAGGATGAACATCATGAAGTTTTCAAAGAAAGACGCAAGCGGAAGGAGTTCGAAATTTTTGTTGGGGGATTGGACAAAGATGCTACTGAAAGCGATCTTAGGAAAGTTTTCAGTGAAGTTGGTGAAGTTACTGAAGTCAGACTTATGATGAACCCTCAGACAAAGAAAAACAAGGGTTTTGCATTCTTGCGTTTTGCAACGGTGGAGCAAGCAAAACGAGCTTGTGCGGAGCTGAAAAACCCAGTGGTTCATGGCAAGCAGTGTGGTGTTACTCCAAGCCAGGACAGTGATACTCTATTTTTAGGCAACATATGCAAGACATGGACAGTAGAAGCATTGAAAGAAAAGTTAAAGCATTATGGTGTTGAGAATATCGAGGATTTGACATTGGTAGAAGACAGTAACAATGTGGGAACGAATCGAGGCTTTGCTTTCTTAGAGTTCTCCTCCCGGTCTGATGCCATGGATGCTTTTAAGCGTCTCCAAAAGAGGGATGTATCTTTTGGAGTGGATAGGCCTGCTAAGGTTTCCTTTGCAGATTCCTTCATTGACCCTGGTGATGAAATCATGGCCCAGGTAAAAACGGTGTTTGTGGATGGTGTTTCTGCTTCTTGGGATGAGGAATATGTCAAAGAACTTCTCAAAAAATATGGGGAGATTGAGAAGGTTGAGCTTGCCCGTAATATGCCATCTGCCAGGAGGAAGGACTTTGGATTTGTTACATTTGATAGCCATGATGCAGCAGTAACTTGCGCAAAAAGTATCAACAATGAGGAATTGGGTGAAGGAGATAATAAGGCTAAAGTTAGGGCTAGATTGTCAAGACCACTTCAGAGAGGAAAAGGAAAACATGCAGCTCGAGGAGATGTCAAGCGGGGGCCAATTCGAGGTGGCAGGAGTCCATGGGCCCGTCCTGTTCCGCGCAGTATTCCTGCTCGCATACCCAGAGGACTCGGACCTCGCTTTCCTCCTGTAGTTGATCGTGGTTTCAAAAGGCCTGCTGTTGTAAGAGAGAGAAGACCAGCAATGGCTGTTCCTCCAAGGAGCAGGCCTGTTGCTCCTTTGCCAAGGTCCTATGATAGGAGACCACCAGTTCCATCGTACCCCAAGAGTGGTTTGAAGAGGGATTATGTTCATCGGGAGGAGATTCATCCTAGAAGCAGAGCTGCTGTAGACTATAGCACGAGAGCAAGTTCAGATAGACGTGCACCTTATAGAGATGATTATCCTCCTCGACCATCTGGTTACCCTGATTTGCCAAGAGGTGGTAGTACATCAAGATCTACAGGAAGAAGAGCCTATGTTGATGATGGCTATAGTCAGAGGTATGAAAGGCCACCTCCAACTTACCGAGAGGGACGTGGCCGTGAGTATGACTCAGTGTCTGGGTCTAAACGTCCATATGCTGCCGTGGATGATGCTCCTCCACGCTATAGCGAGGCAGGGATGCGCCACTCTCGTGCTCGTTTGGATTACGATCTTGGTGGCAGTGCTTCACATTATGGTGATGCTTACGGTGATAGGCTTGGGAGGTCAAACCTAGGATATGGTGCAAGTCGAAGCTCTCTTTCTAGTCATGATACTCATGGGCTTTACAGCAGTCGTCAGGGTATGGGCTATGGTGGAGGACCTTATGGTGGTAGTGATGCTGGTGGGATGTACTCTTCAAGTTTTGGTGGTGATTATATGTCCCGTGGGAGTGATGTTGGTGGTGGTTCTTACTCGTCGCTTTATCCTGGACGCGGTTTAGGTGGTAATAGTTATATGGGAAGCAGTGGTTCTGGATCATACTATTAA
Protein:  
MPPRVTKRTPAGPGSKRAGRGRGAAKVQPEFHPEESNVRSEEEEVEEEKRPIAVEEKEIEPEEKVKTGNKQAEENEDASGRKSDYAKESVDEYEKDERLDLEDNDPEFEPEEYGGVDYDEKETEQDPREEGGEVEEDPEEVDVGEEEEGDVVEEEMEGVPEELEPEEDYERVEEHTEMGDAAEEDEHHEVFKERRKRKEFEIFVGGLDKDATESDLRKVFSEVGEVTEVRLMMNPQTKKNKGFAFLRFATVEQAKRACAELKNPVVHGKQCGVTPSQDSDTLFLGNICKTWTVEALKEKLKHYGVENIEDLTLVEDSNNVGTNRGFAFLEFSSRSDAMDAFKRLQKRDVSFGVDRPAKVSFADSFIDPGDEIMAQVKTVFVDGVSASWDEEYVKELLKKYGEIEKVELARNMPSARRKDFGFVTFDSHDAAVTCAKSINNEELGEGDNKAKVRARLSRPLQRGKGKHAARGDVKRGPIRGGRSPWARPVPRSIPARIPRGLGPRFPPVVDRGFKRPAVVRERRPAMAVPPRSRPVAPLPRSYDRRPPVPSYPKSGLKRDYVHREEIHPRSRAAVDYSTRASSDRRAPYRDDYPPRPSGYPDLPRGGSTSRSTGRRAYVDDGYSQRYERPPPTYREGRGREYDSVSGSKRPYAAVDDAPPRYSEAGMRHSRARLDYDLGGSASHYGDAYGDRLGRSNLGYGASRSSLSSHDTHGLYSSRQGMGYGGGPYGGSDAGGMYSSSFGGDYMSRGSDVGGGSYSSLYPGRGLGGNSYMGSSGSGSYY